SNP Profiles of POUND 4 /A   View Data

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 1234567891011121314
_Input profile
CCAGGGCTTTACCCTTCCCCAAAGCCAG
1._POUND_4_/A
CCAGGGCTTTACCCTTCCCCAAAGCCAG
2._GC-08-159-4-02
CCAGGGCTTTACCCTTCCCCAAAGCCAG
3._GC-08-159-4-02
CCAGGGCTTTACCCTTCCCCAAAGCCAG
4._GC-08-159-4-02
CCAGGGCTTTACCCTTCCCCAAAGCCAG
5._POUND_4_/A
CCAGGGCTTTACCCTTCCCCAAAGCCAG
6._GC-08-158-4-01
CCAGGGCTTTACCCTTCCCCAAAGCCAG
7._POUND_4_/A
CCAGGGCTTTACCCTTCCCCAAAGCCAG
8._GC-08-159-4-02
CCAGGGCTTTACCC_CCCCAAAGCCAG
9._POUND_4_/A
CCAGGGCTTTACCC_CCCCAAAGCCAG
10._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
11._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
12._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
13._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
14._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
15._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
16._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
17._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
18._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
19._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
20._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
21._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
22._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
23._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
24._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
25._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
26._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
27._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
28._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
29._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
30._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
31._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
32._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
33._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
34._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
35._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
36._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
37._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
38._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
39._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
40._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
41._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
42._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
43._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
44._POUND_4_/A
CCAGGGTTCTCCTTGTCTCCATGGCCAA
45._GC-08-159-4-02
CCGGCGCTCT_TTGGTTCCATGGCCAA
46._POUND_4_/A
CCGGCGCTCT_TTGGTTCCATGGCCAA
 1516171819202122232425262728
_Input profile
CCAACGCTCCGGGGAGTTACCGGGTTAA
1._POUND_4_/A
CCAACGCTCCGGGGAGTTACCGGGTTAA
2._GC-08-159-4-02
CCAACGCTCCGGGGAGTTACCGGGTTAA
3._GC-08-159-4-02
CCAACGCTCCGGGGAGTTACCGGGTTAA
4._GC-08-159-4-02
CCAACGCTCCGGGGAGTTACCGGGTTAA
5._POUND_4_/A
CCAACGCTCCGGGGAGTTACCGGGTTAA
6._GC-08-158-4-01
CCAACGCTCCGGGGAGTT_CGGGTTAA
7._POUND_4_/A
CCAACGCTCCGGGGAGTT_CGGGTTAA
8._GC-08-159-4-02
CCAACGCTCCGGGGAGTTAC_GGTTAA
9._POUND_4_/A
CCAACGCTCCGGGGAGTTAC_GGTTAA
10._GC-04-043-3-07
CCATGGTTTTCGGGAACTAAGGGTCTCC
11._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
12._GC-08-158-4-01
CCATGG_TTCGGGAACTAAGGGTCTCC
13._POUND_4_/A
CCATGG_TTCGGGAACTAAGGGTCTCC
14._GC-08-158-4-01
CCATGGTTTTCGGGAACTAAGGGTCTCC
15._GC-04-043-3-07
CCATGGTTTTCGGGAACTAAGGGTCTCC
16._GC-04-043-3-07
CCATGGTTTTCGGGAACTAAGGGTCTCC
17._GC-04-043-3-07
CCATGGTTTTCGGGAACTAAGGGTCTCC
18._GC-04-043-3-07
CCATGGTTTTCGGGAACTAAGGGTCTCC
19._GC-04-043-3-07
CCATGGTTTTCGGGAACTAAGGGTCTCC
20._GC-08-158-4-01
CCATGGTTTTCGGGAACTAAGGGTCTCC
21._GC-08-158-4-01
CCATGGTTTTCGGGAACTAAGGGTCTCC
22._GC-08-158-4-01
CCATGGTTTTCGGGAACTAAGGGTCTCC
23._GC-08-159-4-02
CCATGGTTTTCGGGAACTAAGGGTCTCC
24._GC-08-159-4-02
CCATGGTTTTCGGGAACTAAGGGTCTCC
25._GC-08-159-4-02
CCATGGTTTTCGGGAACTAAGGGTCTCC
26._GC-08-159-4-02
CCATGGTTTTCGGGAACTAAGGGTCTCC
27._GC-08-158-4-01
CCATGGTTTTCGGGAACTAAGGGTCTCC
28._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
29._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
30._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
31._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
32._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
33._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
34._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
35._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
36._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
37._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
38._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
39._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
40._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
41._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
42._GC-04-043-3-07
CCATGGTTTTCGGGAACTAAGGGTCTCC
43._POUND_4_/A
CCATGGTTTTCGGGAACTAAGGGTCTCC
44._POUND_4_/A
CCAAGGCTTTCGGTAACCACCGGGCCAC
45._GC-08-159-4-02
CTAACGTTTTCGGGGGTTCCGGGGCCAC
46._POUND_4_/A
CTAACGTTTTCGGGGGTTCCGGGGCCAC
 293031323334353637383940  
_Input profile
AAGGAACCAGCCAACCGGAAATGGX_XX_X
1._POUND_4_/A
AAGGAACCAGCCAACCGGAAATGGX_XX_X
2._GC-08-159-4-02
AAGGAACCAGCCAACCGGAAATGGX_XX_X
3._GC-08-159-4-02
AAGGAACCAGCCAACCGGAAATGGX_XX_X
4._GC-08-159-4-02
AAGGAACCAGCCAACCGGAAATGGX_XX_X
5._POUND_4_/A
AAGGAACCAGCCAACCGGAAATGGX_XX_X
6._GC-08-158-4-01
AAGGAACCAGCCAACCGGAAATGGX_XX_X
7._POUND_4_/A
AAGGAACCAGCCAACCGGAAATGGX_XX_X
8._GC-08-159-4-02
AAGGAACCAGCCAACCGGAAATGGX_XX_X
9._POUND_4_/A
AAGGAACCAGCCAACCGGAAATGGX_XX_X
10._GC-04-043-3-07
AGGGAACTAGCGACCCGGCCTTGGX_XX_X
11._POUND_4_/A
AGGGAACTAGCGACCCGGCCTTGGX_XX_X
12._GC-08-158-4-01
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
13._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
14._GC-08-158-4-01
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
15._GC-04-043-3-07
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
16._GC-04-043-3-07
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
17._GC-04-043-3-07
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
18._GC-04-043-3-07
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
19._GC-04-043-3-07
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
20._GC-08-158-4-01
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
21._GC-08-158-4-01
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
22._GC-08-158-4-01
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
23._GC-08-159-4-02
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
24._GC-08-159-4-02
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
25._GC-08-159-4-02
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
26._GC-08-159-4-02
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
27._GC-08-158-4-01
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
28._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
29._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
30._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
31._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
32._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
33._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
34._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
35._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
36._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
37._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
38._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
39._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
40._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
41._POUND_4_/A
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
42._GC-04-043-3-07
GGGGAACTAGCGAC_GGCCTTGGX_XX_X
43._POUND_4_/A
GGGGAACTAGCGAC_GGCCTTGGX_XX_X
44._POUND_4_/A
AAAGAACTAACGACCTGGCCTTGGX_XX_X
45._GC-08-159-4-02
AGAAATCCAGCCCCTTGGAAATCGX_XX_X
46._POUND_4_/A
AGAAATCCAGCCCCTTGGAAATCGX_XX_X

Input profile: POUND_4_/A

 
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Mars Center for Cocoa Science, Brazil
Location: 8402 13
 Dapeng Zhang, 2016

1._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 10
 Dapeng Zhang, 2016

2._POUND_4_/A GC-08-159-4-02

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

3._POUND_4_/A GC-08-159-4-02

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

4._POUND_4_/A GC-08-159-4-02

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

5._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 8
 Dapeng Zhang, 2016

6._POUND_4_/A GC-08-158-4-01

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

7._POUND_4_/A

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 8
 Dapeng Zhang, 2016

8._POUND_4_/A GC-08-159-4-02

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._POUND_4_/A

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 5
 Dapeng Zhang, 2016

10._POUND_4_/A GC-04-043-3-07

65 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

11._POUND_4_/A

65 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 6
 Dapeng Zhang, 2016

12._POUND_4_/A GC-08-158-4-01

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

13._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 9
 Dapeng Zhang, 2016

14._POUND_4_/A GC-08-158-4-01

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

15._POUND_4_/A GC-04-043-3-07

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

16._POUND_4_/A GC-04-043-3-07

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

17._POUND_4_/A GC-04-043-3-07

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

18._POUND_4_/A GC-04-043-3-07

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

19._POUND_4_/A GC-04-043-3-07

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP4
 Mars, 2018

20._POUND_4_/A GC-08-158-4-01

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

21._POUND_4_/A GC-08-158-4-01

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

22._POUND_4_/A GC-08-158-4-01

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

23._POUND_4_/A GC-08-159-4-02

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

24._POUND_4_/A GC-08-159-4-02

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

25._POUND_4_/A GC-08-159-4-02

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

26._POUND_4_/A GC-08-159-4-02

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

27._POUND_4_/A GC-08-158-4-01

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

28._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

29._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 2 > FP
 Dapeng Zhang, 2016

30._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 3 > FP
 Dapeng Zhang, 2016

31._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 4 > FP
 Dapeng Zhang, 2016

32._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 7 > FP
 Dapeng Zhang, 2016

33._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 5
 Dapeng Zhang, 2016

34._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 7
 Dapeng Zhang, 2016

35._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 7
 Dapeng Zhang, 2016

36._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 11
 Dapeng Zhang, 2016

37._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 12
 Dapeng Zhang, 2016

38._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 6
 Dapeng Zhang, 2016

39._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 7
 Dapeng Zhang, 2016

40._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 9
 Dapeng Zhang, 2016

41._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 12
 Dapeng Zhang, 2016

42._POUND_4_/A GC-04-043-3-07

62.8 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

43._POUND_4_/A

62.8 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 5
 Dapeng Zhang, 2016

44._POUND_4_/A

62.5 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F411 T15
 Dapeng Zhang, 2016

45._POUND_4_/A GC-08-159-4-02

59 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

46._POUND_4_/A

59 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 4
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25